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News Articles Archives:
- Archives 2022
- Archives 2021
- Archives 2020
- Archives 2019
- Archives 2018
- PATRIC November 2018 Data and Website Release
- PATRIC Instructional Videos
- PATRIC Office Hours, November 30, 2018, 11:00am EST
- PATRIC Webinar – Genome Annotation Service, November 20, 2018, 11:00am EST
- PATRIC September 2018 Data Release
- PATRIC/RAST Workshop at Argonne National Laboratory, October 23-25, 2018
- PATRIC July 2018 Data and Website Release
- PATRIC Webinar – Comprehensive Genome Analysis Service, August 8, 2018, 2:00pm ET
- PATRIC Webinar – Genome Assembly via Command Line Interface, July 19, 2018, 3:00pm EDT
- PATRIC May 2018 Data and Website Release
- PATRIC/RAST Workshop at ASM Microbe, June 7, 2018, Atlanta, GA
- PATRIC March 2018 Data and Website Release
- PATRIC Webinar – Metagenomic Binning Service, Wednesday February 28, 2018, 3:00pm EST (20:00 GMT)
- PATRIC Video Tutorial – Proteome Comparison
- PATRIC January 2018 Data and Website Release
- PATRIC Webinar – Proteome Comparison Service, January 30, 2018, 4:00pm EST
- PATRIC/RAST Workshop at Argonne National Laboratory, May 7-9, 2018
- Archives 2017
- PATRIC Video Tutorial – Phylogenetic Tree Builder
- PATRIC November 2017 Data and Website Release
- PATRIC Webinar – Phylogenetic Tree Builder, November 30, 2017, 3:00pm EST
- PATRIC September 2017 Data Release
- PATRIC/RAST Workshop at Argonne National Laboratory, November 14-16, 2017
- PATRIC July 2017 Data and Website Release
- PATRIC/RAST Workshop at Argonne National Laboratory, August 14-16, 2017
- PATRIC May 2017 Release brings total genomes to over 100,000 and includes 21 host response data sets
- PATRIC Workshop at ICSB 2017 at Virginia Tech, August 6, 2017
- PATRIC March 2017 Release Features over 3600 New Genomes, and New Functionality and Data Including an Antibiotics Database, AMR Phenotype Information, a Close Genome Finder Service, HPI/PPI Data and Visualization, a Compare Region Viewer, an ID-Mapping Tool, and Enhanced Global Search.
- PATRIC Workshop at GLBIO 2017 in Chicago, May 17, 2017
- PATRIC January 2017 Release features 5938 new genomes and new AMR phenotype data
- Archives 2016
- PATRIC November Release features over 9000 New Genomes, Host Genomes and Annotations, Essential Gene Predictions, Command Line Interface, RNA-Seq Service Enhancements and Other Updates.
- PATRIC Workshop at GLBIO 2017 in Chicago, May 17, 2017
- PATRIC/RAST Tutorial Workshop December 12-14, 2016
- PATRIC September Release features over 4500 New Genomes, Literature Feferences, and Assembly Service Enhancements
- PATRIC/RAST Workshop, November 9-11, 2016
- PATRIC July 2016 Release Features Over 7600 New Genomes and AMR Panel Data for Approximately 5400 Genomes. PATRIC Also Releases Alpha Version of New Website Design.
- PATRIC May 2016 Release Features Over 700 New Genomes and AMR Panel Data for Approximately 1800 Genomes
- First U.S. Case of E. coli Resistant to Colistin
- PATRIC/RAST Tutorial Workshop, July 26-28, 2016
- PATRIC / RAST Tutorial Workshop Agenda
- PATRIC March 2016 Release Features a New Variation Analysis Service, Service Enhancements, New AMR and other Data, and over 9000 New Genomes
- PATRIC Antimicrobial Resistance (AMR) Gene Curation
- Omics4TB TFOE Expression Experiments
- Omics4TB ChIP-Seq Experiments
- GUNK Experiment 1
- PATRIC January 2016 Release Features Over 2400 New Genomes
- FLUTE Experiment 2
- Archives 2015
- PATRIC December 2015 Release Features over 20,000 New Genomes and PacBio Assembly Support
- PATRIC Workshop – Chicago
- PATRIC September 2015 Data and Website Release
- PATRIC Workshop – San Diego State University
- PATRIC Workshop Agenda – University of Florida
- PATRIC June 2015 Release Features Integrated Comparative Analysis Capabilities with User-Supplied Genomes and New Services for Protein-Based Genome Comparison, RNA-Seq Analysis, and Metabolic Modeling
- PATRIC Workshop at Arlington Research Center, May 2
- PATRIC/RAST Tutorial Workshop, June 15-17, 2015
- PATRIC March 2015 Release Features Genome Assembly and Annotation Services and over 6,000 New Genomes
- Maulik Shukla Presents PATRIC at the University of Pune, India December 24, 2014
- Archives 2014
- PATRIC December 2014 Release Features Additional Support and Data for Antimicrobial Resistance and over 5,000 New Genomes, Including Archaea
- PATRIC October 2014 Release Features New Special Data Sets and Updated Project Information
- Dr. Bruno Sobral Gives Presentation at Institut Pasteur on October 1, 2014
- Comparative Genomic Analysis at PATRIC, A Bioinformatic Resource Center. Book chapter in Host Bacterial Infections, Methods in Molecular Microbiology.
- Dr. Bruno Sobral Gives Presentation at the ILSI IAFP 2014 Conference in Indianapolis, Indiana on August 4, 2014.
- Dr. Rebecca Wattam Presents “Microbiology in the Post-Genome Era” as part of a Research Experience for Undergrads
- PATRIC July 2014 Release Features New Circular Genome Viewer, Group Explorer, Integration of Protein-Protein Interaction Data, and New Genomic and Transcriptomic Data
- Standardized metadata for human pathogen/vector genomic sequences
- PATRIC May 2014 Release: New Easily Accessible and Manually Curated Specialty Genes Data
- Dr. Bruno Sobral Gives Presentation at the Universidade Federal de Minas Gerais, Brazil
- PATRIC April 2014 Release: New Data Summary and Special Collections Pages
- Enabling comparative modeling of closely related genomes: example genus Brucella
- Body Weight Selection Affects Quantitative Genetic Correlated Responses in Gut Microbiota
- Comparative phylogenomics and evolution of the Brucellae reveal a path to virulence.
- PATRIC Now Has Over 15,000 Consistently Annotated Genomes!
- Local News Story About PATRIC Entitled Virginia Tech Disease Resource Goes Global
- PATRIC December 2013 Data and Metadata Release
- Archives 2013
- PATRIC, the bacterial bioinformatics database and analysis resource
- New Protein Family Sorter and Heatmap Video Tutorial
- PATRIC September 2013 Release Highlights Multiple Analysis Tool Enhancements, New Tutorials Page, and New Genomic and Transcriptomic Data
- New “Transcriptomics Data at PATRIC” Tutorial
- PATRIC May 2013 Release Features New Data, Improved Metadata-Site Integration and Updated KEGG Maps
- New “Upload Your Own Transcriptomics Data” Tutorial
- PATRIC March 2013 Release Offers Multiple Website Enhancements, New Features, and New Data
- Bacterial DNA sifted from the Trichoplax adhaerens (Animalia:Placozoa) genome project reveals a putative rickettsial endosymbiont
- Dr. Bruno Sobral Attends 5th Meeting on Global Microbial Identifier
- Peptide nucleic acids inhibit growth of Brucella suis in pure culture and in infected murine macrophages
- PATRIC December 2012 Release Provides Enhanced Support for RefSeq Names and Gene Symbols
- Archives 2012
- PATRIC November 2012 Release Introduces New Transcriptomics Data and Analysis Tools and over 370 New Genomes
- Dr. Rick Stevens Showcases PATRIC at The 4th Annual Systems Biology Programmatic Meeting
- SEED Servers: High-Performance Access to the SEED Genomes, Annotations, and Metabolic Models
- PATRIC Team Presents Workshop at Duke and UNC
- PATRIC October 2012 Data Release Adds 741 New Genomes
- TolC-Dependent Secretion of an Ankyrin Repeat-Containing Protein of Rickettsia typhi.
- PATRIC September 2012 Data Release Includes 750 New Genomes and Updated Figfam Annotations
- PATRIC May 2012 Release Introduces New Homepage, Workflow Pages, over 1200 New Genomes and More
- Pathogen Portal releases Mouse Model Strain Selection Guide
- Argo: an integrative, interactive, text mining-based workbench supporting curation
- PATRIC Special Data Release Featuring 12 New Mycobacterium tuberculosis Genomes
- Dr. Bruno Sobral Named as a 2012 Benjamin Franklin Award Finalist
- Tuberculosis Community Annotation Project (TBCAP) Jamboree
- A Rickettsia genome overrun by mobile genetic elements provides insight into the acquisition of genes characteristic of an obligate intracellular lifestyle.
- Website Improvements; New Genome Data from RefSeq & Genbank; New Annotations via RAST.
- Archives 2011
- PATRIC November 2011 Release Highlights New Global Search and Enhanced Personal Workspace
- RAST German E. coli Strain Annotation Using Cloud Computing.
- PATRIC: The Comprehensive Bacterial Bioinformatics Resource with a Focus on Human Pathogenic Species
- PATRIC July 2011 Release Features Integration of Genome Metadata
- E. coli Outbreak: Updated Analysis of Unique and Divergent Proteins
- Driscoll, Mao and Gabbard Publish Work on PATRIC’s Host-Pathogen Data and Visualizations
- Unique and Divergent Proteins in E. coli Outbreak Strains
- E. coli outbreak: New Comprehensive Comparisons
- Drs. Sobral and Wattam Author a Chapter in “Brucella: Molecular Microbiology and Genetics”.
- PATRIC April 2011 Release Offers an Abundance of New and Enhanced Website Features, Tools, and Data
- PATRIC Team Publishes Paper on Text Mining for Type IV Secretion Systems.
- New Genome Data from RefSeq & Genbank; New Annotations via RAST
- Archives 2010 and earlier
- PATRIC December 2010 Release Offers Scores of New and Improved Website Features and Data
- PATRIC Driving Biological Projects Awarded
- Dr. Dyer and Collaborators publish on human-bacterial pathogen protein interaction networks.
- PATRIC Website Introduces New Look, Enhanced Tools and Additional Data
- Dr. Bruno Sobral and Collaborators Publish Paper on Infectious Disease Text Mining
- New Genome Data from RefSeq & Genbank; New Annotations via RAST
- PATRIC’s “Tree of Life” for Gamma-proteobacteria Featured in Science Daily
- Drs. Gillespie and Sobral Reveal Diverse Rickettsiales Type IV Secretion System
- Mr. Dan Sullivan Publishes Paper on PATRIC Data Integration
- PATRIC Collaborators Publish an Analysis of Rickettsia Typhi-infected and Uninfected Cat Flea Midgut cDNA Libraries
- PATRIC Website Offers New Annotation Types, Genome Browser, Protein Family Sorter and More
- PATRIC Collaborators Publish Paper on Anaplasma Marginale Type IV Secretion System Proteins VirB2, VirB7, VirB11, and VirD4
- Drs. Williams and Dickerman Publish Paper on Phylogeny of Gammaproteobacteria
- Drs. Azad and Sobral Publish on Typhus Group-specific Protease in Rickettsiae
- Additional Genome Data Added From RefSeq
- PATRIC Launches Initial Website for All-Baterial Bioinformatics Resource Center
- VBI Awarded $27M from NIH to Support Infectious Disease Research
- Bioinformatics Resource Centers for Infectious Diseases
- Drs. Snyder and Sobral Publish on PATRIC: a PathoSystems Resource Integration Center