Website Improvements; New Genome Data from RefSeq & Genbank; New Annotations via RAST.¶
Improved Phylogenetic Tree Viewer:
Recent improvements to the phylogenetic tree viewer allow users to select their genomes of interest from the phylogenetic tree and save them as a genome group to their workspace.
Other Improvements and Bug Fixes:
This release also includes various minor improvements and bug fixes in some of the existing data and functionalities at PATRIC.
All of the tables on the PATRIC website now include mouse over feature which allows user to see full content of any cell in the table when the cell content is very long and is displayed only partially.
New genomes and annotations
Since November 2011, 105 new genomes have been added to PATRIC and 104 of them have been annotated using RAST.
A summary of the genomes available on the PATRIC website through February, 2012 is provided in the table below:
PATRIC | Legacy BRC | RefSeq | |
|---|---|---|---|
Number of genomes | 3911 | 337 | 4014 |
Number of Complete genomes | 1723 | 237 | 1711 |
Number of WGS genomes | 2188 | 96 | 1906 |
Number of Plasmid only genomes | 4 | 397 |